Erminal 25 amino acid residues [12]. It is a mitochondrial matrix protein with high amount in mouse kidney, heart, and liver tissues [13]. The first identified substrate of SIRT3 was Acetyl-CoA Synthetase 2 (AceCS2) [14]. Although plenty of literatures supported SIRT3 was involvedin mitochondrial energy production and substrate oxidation [15], Hexokinase II Inhibitor II, 3-BP site Expression of SIRT3 in cancer has been controversial. For example, Ashraf et al. reported that SIRT3 was markedly increased in lymph node-positive breast cancer biopsies, compared to the normal tissues [16]. However, in another study, significant decrease of SIRT3 was observed in 992 human breast cancer samples [17]. SIRT3 was demonstrated to increase in oral squamous cell carcinoma (OSCC) cell lines and human OSCC tissue samples [18]. Recently, SIRT3 was shown to downregulated in 4 paired HCC tissues, compared to the adjacent liver tissues [19]. Based on the discrepancy in the current literatures, to clearly investigate the expression of SIRT3 and clinical significance in different types of cancer is of particular interests in developing SIRT3 to a promising therapeutic target in cancer treatment. In the present study, the expression of SIRT3 and its clinical significance in HCC were investigated. We examined SIRT3 expression in HCC cell lines and human tissue samples, evaluated the association of SIRT3 expression and clinicopathological variables, and assessed the role of SIRT3 in HCC prognosis. Our data showed a noticeable decrease of SIRT3 in HCC and significant correlations of SIRT3 expression with clinical parameters and overall survival of HCC patients.SIRT3 as a Prognostic I-BRD9 chemical information Biomarker in HCCFigure 1. Expression of SIRT3 
in HCC cell lines and tissue samples. A. mRNA level of SIRT3 in immobilized liver cell line (MiHA) and HCC cell lines was determined by qRT-PCR. Three independent experiments were performed. Data are mean 6 SD. B. Representative pattern of SIRT3 protein expressed in cell lines was shown. The ratio of SIRT3/GAPDH was indicated as well. C. mRNA level of SIRT3 in HCC and corresponding adjacent liver tissue was determined in 16 patients. Relative SIRT3 mRNA in HCC tissues was presented. D. Wilcoxon matched paired test revealed the significant alteration of SIRT3 mRNA in tissue samples. E. Expression of SIRT3 protein in 16 paired HCC and adjacent normal liver tissues were examined by western blot. F. Relative intensity of PLK4 normalized to GAPDH was calculated. doi:10.1371/journal.pone.0051703.gMaterials and Methods Cell CultureNon-tumorigenic immortalized liver cell line (MiHA) was kindly provided by XY Guan from The University of Hong Kong and maintained in Dulbecco’s modified Eagle’s medium (DMEM) (Gibco, Gaithersburg, MD, USA). PLC/PRF/5 and SK-hep1 cell lines were purchased from American Type Culture Collection (ATCC, Manassas, VA), and cultured in DMEM containing 10 fetal bovine serum (FBS), 100 mg/ml penicillin, and 100 mg/ml streptomycin. SMMC-7721, 12926553 Bel-7404, Bel-7402, Huh7, HepG2 and QSG-7703 cell lines, obtained from the Type Culture Collection Cell Bank, Chinese Academy of Science Committee (Shanghai, China), were maintained in Roswell Park Memorial Institute (RPMI) 1640 with 10 of fetal bovine serum(FBS), 100 mg/ml of penicillin, and 100 mg/ml of streptomycin. All cells were incubated in a humidified atmosphere of 5 CO2 and 95 air at 37uC.Patients and Tissue SpecimensIn this study, all primary HCC specimens along with complete clinical and pathological data were c.Erminal 25 amino acid residues [12]. It is a mitochondrial matrix protein with high amount in mouse kidney, heart, and liver tissues [13]. The first identified substrate of SIRT3 was Acetyl-CoA Synthetase 2 (AceCS2) [14]. Although plenty of literatures supported SIRT3 was involvedin mitochondrial energy production and substrate oxidation [15], expression of SIRT3 in cancer has been controversial. For example, Ashraf et al. reported that SIRT3 was markedly increased in lymph node-positive breast cancer biopsies, compared to the normal tissues [16]. However, in another study, significant decrease of SIRT3 was observed in 992 human breast cancer samples [17]. SIRT3 was demonstrated to increase in oral squamous cell carcinoma (OSCC) cell lines and human OSCC tissue samples [18]. Recently, SIRT3 was shown to downregulated in 4 paired HCC tissues, compared to the adjacent liver tissues [19]. Based on the discrepancy in the current literatures, to clearly investigate the expression of SIRT3 and clinical significance in different types of cancer is of particular interests in developing SIRT3 
to a promising therapeutic target in cancer treatment. In the present study, the expression of SIRT3 and its clinical significance in HCC were investigated. We examined SIRT3 expression in HCC cell lines and human tissue samples, evaluated the association of SIRT3 expression and clinicopathological variables, and assessed the role of SIRT3 in HCC prognosis. Our data showed a noticeable decrease of SIRT3 in HCC and significant correlations of SIRT3 expression with clinical parameters and overall survival of HCC patients.SIRT3 as a Prognostic Biomarker in HCCFigure 1. Expression of SIRT3 in HCC cell lines and tissue samples. A. mRNA level of SIRT3 in immobilized liver cell line (MiHA) and HCC cell lines was determined by qRT-PCR. Three independent experiments were performed. Data are mean 6 SD. B. Representative pattern of SIRT3 protein expressed in cell lines was shown. The ratio of SIRT3/GAPDH was indicated as well. C. mRNA level of SIRT3 in HCC and corresponding adjacent liver tissue was determined in 16 patients. Relative SIRT3 mRNA in HCC tissues was presented. D. Wilcoxon matched paired test revealed the significant alteration of SIRT3 mRNA in tissue samples. E. Expression of SIRT3 protein in 16 paired HCC and adjacent normal liver tissues were examined by western blot. F. Relative intensity of PLK4 normalized to GAPDH was calculated. doi:10.1371/journal.pone.0051703.gMaterials and Methods Cell CultureNon-tumorigenic immortalized liver cell line (MiHA) was kindly provided by XY Guan from The University of Hong Kong and maintained in Dulbecco’s modified Eagle’s medium (DMEM) (Gibco, Gaithersburg, MD, USA). PLC/PRF/5 and SK-hep1 cell lines were purchased from American Type Culture Collection (ATCC, Manassas, VA), and cultured in DMEM containing 10 fetal bovine serum (FBS), 100 mg/ml penicillin, and 100 mg/ml streptomycin. SMMC-7721, 12926553 Bel-7404, Bel-7402, Huh7, HepG2 and QSG-7703 cell lines, obtained from the Type Culture Collection Cell Bank, Chinese Academy of Science Committee (Shanghai, China), were maintained in Roswell Park Memorial Institute (RPMI) 1640 with 10 of fetal bovine serum(FBS), 100 mg/ml of penicillin, and 100 mg/ml of streptomycin. All cells were incubated in a humidified atmosphere of 5 CO2 and 95 air at 37uC.Patients and Tissue SpecimensIn this study, all primary HCC specimens along with complete clinical and pathological data were c.
